Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virc1 protein | SAMN04488094_11729 | Not Available | Positive | 4279215 - 4279976 | 27178.2 |
| hypothetical protein | SAMN04488094_11730 | Not Available | Positive | 4279976 - 4280572 | 21309.1 |
| serine/threonine-protein kinase hipa | SAMN04488094_11731 | Not Available | Positive | 4281429 - 4282676 | 45843.6 |
| hypothetical protein | SAMN04488094_11732 | Not Available | Positive | 4282673 - 4283800 | 40718.9 |
| aaa domain-containing protein | SAMN04488094_11733 | Not Available | Positive | 4283875 - 4286499 | 94435.6 |
| wgr domain-containing protein, predicted dna-binding domain in molr | SAMN04488094_11734 | Not Available | Negative | 4286625 - 4286942 | 11864.4 |
| protein of unknown function | SAMN04488094_11735 | Not Available | Negative | 4287027 - 4287962 | 34918.6 |
| toprim domain-containing protein | SAMN04488094_11736 | Not Available | Negative | 4288325 - 4289356 | 36600.8 |
| phospholipid n-methyltransferase | SAMN04488094_11737 | Not Available | Negative | 4289360 - 4293739 | 157452.0 |
| hypothetical protein | SAMN04488094_11738 | Not Available | Positive | 4293917 - 4294210 | 11139.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
