Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_11719 | Not Available | Positive | 4268342 - 4268830 | 17655.0 |
| type iv secretion system protein virb6 | SAMN04488094_11720 | Not Available | Positive | 4268827 - 4269891 | 36749.5 |
| hypothetical protein | SAMN04488094_11721 | Not Available | Negative | 4270060 - 4270842 | 29970.0 |
| pin domain-containing protein | SAMN04488094_11722 | Not Available | Negative | 4270850 - 4271428 | 22300.7 |
| dna binding domain-containing protein, excisionase family | SAMN04488094_11723 | Not Available | Negative | 4271425 - 4271865 | 15851.9 |
| hypothetical protein | SAMN04488094_11724 | Not Available | Negative | 4272188 - 4273102 | 33947.8 |
| transcriptional regulator, abiei antitoxin, type iv ta system | SAMN04488094_11725 | Not Available | Negative | 4273092 - 4273718 | 23944.7 |
| type iv secretion system protein vird4 | SAMN04488094_11726 | Not Available | Negative | 4274252 - 4276225 | 72816.4 |
| type iv secretion system t-dna border endonuclease vird2 | SAMN04488094_11727 | Not Available | Negative | 4276235 - 4278070 | 66344.6 |
| helix-turn-helix domain-containing protein | SAMN04488094_11728 | Not Available | Negative | 4278063 - 4278617 | 19548.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
