Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix domain-containing protein | SAMN04488094_11684 | Not Available | Positive | 4252663 - 4253139 | 18194.8 |
| transposase, mutator family | SAMN04488094_11685 | Not Available | Positive | 4253260 - 4253467 | 7868.31 |
| transposase dde domain-containing protein | SAMN04488094_1171 | Not Available | Positive | 4253532 - 4254464 | 34656.9 |
| lysr substrate binding domain-containing protein | SAMN04488094_1172 | Not Available | Positive | 4254551 - 4254784 | 8502.28 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488094_1173 | Not Available | Negative | 4255055 - 4255513 | 16600.0 |
| protein of unknown function | SAMN04488094_1174 | Not Available | Negative | 4255617 - 4256165 | 18948.3 |
| hypothetical protein | SAMN04488094_1175 | Not Available | Negative | 4256412 - 4257023 | 22505.8 |
| hypothetical protein | SAMN04488094_1176 | Not Available | Negative | 4257351 - 4258001 | 24245.8 |
| hypothetical protein | SAMN04488094_1177 | Not Available | Negative | 4258066 - 4258368 | 11348.4 |
| hypothetical protein | SAMN04488094_1178 | Not Available | Positive | 4258551 - 4258880 | 12555.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
