Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488094_11674 | Not Available | Positive | 4241242 - 4241487 | 8600.78 |
| hypothetical protein | SAMN04488094_11675 | Not Available | Positive | 4241491 - 4241919 | 14531.2 |
| hypothetical protein | SAMN04488094_11676 | Not Available | Positive | 4241924 - 4242439 | 18318.5 |
| glyoxylase, beta-lactamase superfamily ii | SAMN04488094_11677 | Not Available | Positive | 4242450 - 4243331 | 32212.2 |
| sulfide:quinone oxidoreductase | SAMN04488094_11678 | Not Available | Positive | 4243407 - 4245095 | 61152.7 |
| sulfate permease, sulp family | SAMN04488094_11679 | Not Available | Positive | 4245158 - 4246897 | 61630.7 |
| hypothetical protein | SAMN04488094_11680 | Not Available | Positive | 4246990 - 4248099 | 41987.9 |
| deoxyribose-phosphate aldolase | SAMN04488094_11681 | Not Available | Positive | 4248200 - 4249210 | 36584.5 |
| aldehyde dehydrogenase (nad+) | SAMN04488094_11682 | Not Available | Positive | 4249263 - 4251593 | 81396.1 |
| dna replication and repair protein reco | SAMN04488094_11683 | Not Available | Positive | 4251825 - 4252559 | 26399.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
