Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c4-dicarboxylate transporter, dctm subunit | SAMN04488094_11664 | Not Available | Positive | 4227656 - 4229050 | 49118.3 |
| predicted atpase | SAMN04488094_11665 | Not Available | Negative | 4229143 - 4229685 | 19835.8 |
| Trna-ala | Not Available | Not Available | Positive | 4229857 - 4229932 | Not Available |
| tigr02300 family protein | SAMN04488094_11667 | Not Available | Negative | 4230002 - 4230334 | 12098.4 |
| hypothetical protein | SAMN04488094_11668 | Not Available | Positive | 4230438 - 4231130 | 25775.0 |
| transcriptional regulator, gntr family | SAMN04488094_11669 | Not Available | Positive | 4231096 - 4231821 | 26883.0 |
| acyl-coa dehydrogenase | SAMN04488094_11670 | Not Available | Positive | 4231947 - 4233047 | 39305.1 |
| ca2+-transporting atpase | SAMN04488094_11671 | Not Available | Negative | 4233108 - 4235720 | 92475.0 |
| inosine-uridine preferring nucleoside hydrolase | SAMN04488094_11672 | Not Available | Positive | 4236523 - 4238613 | 72761.4 |
| elongation factor g | SAMN04488094_11673 | Not Available | Negative | 4238749 - 4240677 | 68780.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
