Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hint domain-containing protein | SAMN04488094_11654 | Not Available | Negative | 4214787 - 4215869 | 37858.2 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN04488094_11655 | Not Available | Negative | 4216112 - 4216906 | 29193.0 |
| diacylglycerol kinase family enzyme | SAMN04488094_11656 | Not Available | Negative | 4216903 - 4217877 | 35372.6 |
| isocitrate dehydrogenase | SAMN04488094_11657 | Not Available | Negative | 4218064 - 4220286 | 79503.8 |
| l-fucose isomerase, c-terminal domain | SAMN04488094_11658 | Not Available | Negative | 4220576 - 4222165 | 57289.3 |
| fggy-family pentulose kinase | SAMN04488094_11659 | Not Available | Negative | 4222162 - 4223796 | 57530.9 |
| dna-binding transcriptional regulator, gntr family | SAMN04488094_11660 | Not Available | Negative | 4223923 - 4224603 | 25289.9 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN04488094_11661 | Not Available | Negative | 4224630 - 4225517 | 30774.9 |
| c4-dicarboxylate-binding protein dctp | SAMN04488094_11662 | Not Available | Positive | 4225867 - 4226868 | 36718.4 |
| c4-dicarboxylate transporter, dctq subunit | SAMN04488094_11663 | Not Available | Positive | 4226948 - 4227649 | 26335.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
