Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_11644 | Not Available | Positive | 4202846 - 4203853 | 37289.4 |
| extensin-like protein c-terminus | SAMN04488094_11645 | Not Available | Negative | 4203974 - 4204975 | 34728.5 |
| cyclohexadieny/prephenate dehydrogenase | SAMN04488094_11646 | Not Available | Negative | 4204972 - 4205919 | 34450.1 |
| histidinol-phosphate aminotransferase | SAMN04488094_11647 | Not Available | Negative | 4205916 - 4207001 | 38856.5 |
| hemolysin-type calcium-binding repeat-containing protein | SAMN04488094_11648 | Not Available | Positive | 4207169 - 4208068 | 32357.3 |
| homospermidine synthase | SAMN04488094_11649 | Not Available | Negative | 4208086 - 4209507 | 51959.1 |
| putative dna modification/repair radical sam protein | SAMN04488094_11650 | Not Available | Positive | 4209638 - 4210879 | 46116.3 |
| dna polymerase | SAMN04488094_11651 | Not Available | Positive | 4210879 - 4212315 | 53803.6 |
| atp-dependent rna helicase rhle | SAMN04488094_11652 | Not Available | Negative | 4212363 - 4213595 | 44435.1 |
| ssu ribosomal protein s4p | SAMN04488094_11653 | Not Available | Negative | 4213992 - 4214612 | 23795.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
