Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fmn adenylyltransferase | SAMN04488094_11624 | Not Available | Positive | 4179564 - 4180544 | 35617.9 |
| hypothetical protein | SAMN04488094_11625 | Not Available | Positive | 4180541 - 4181128 | 21730.2 |
| methyl-accepting chemotaxis protein | SAMN04488094_11626 | Not Available | Positive | 4181207 - 4183138 | 69217.1 |
| l-threonine aldolase | SAMN04488094_11627 | Not Available | Positive | 4183204 - 4184262 | 37809.5 |
| methyltransferase domain-containing protein | SAMN04488094_11628 | Not Available | Positive | 4184405 - 4185067 | 24249.3 |
| 2-hydroxychromene-2-carboxylate isomerase | SAMN04488094_11629 | Not Available | Negative | 4185132 - 4185728 | 21785.6 |
| ribose-phosphate pyrophosphokinase | SAMN04488094_11630 | Not Available | Positive | 4185914 - 4186924 | 36400.9 |
| atp synthase f1 subcomplex epsilon subunit | SAMN04488094_11631 | Not Available | Negative | 4187037 - 4187435 | 13980.5 |
| f-type h+-transporting atpase subunit beta | SAMN04488094_11632 | Not Available | Negative | 4187445 - 4188866 | 50673.7 |
| f-type h+-transporting atpase subunit gamma | SAMN04488094_11633 | Not Available | Negative | 4188889 - 4189770 | 32155.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
