Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488094_11614 | Not Available | Negative | 4172001 - 4172264 | 9656.62 |
| hypothetical protein | SAMN04488094_11615 | Not Available | Negative | 4172293 - 4172580 | 10193.9 |
| hypothetical protein | SAMN04488094_11616 | Not Available | Positive | 4172815 - 4173060 | 9131.67 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04488094_11617 | Not Available | Positive | 4173041 - 4173523 | 17512.1 |
| threonine/homoserine efflux transporter rhta | SAMN04488094_11618 | Not Available | Negative | 4173520 - 4174368 | 28530.2 |
| chaperonin groel | SAMN04488094_11619 | Not Available | Negative | 4174526 - 4176169 | 57700.4 |
| chaperonin groes | SAMN04488094_11620 | Not Available | Negative | 4176220 - 4176507 | 10191.4 |
| manganese-dependent inorganic pyrophosphatase | SAMN04488094_11621 | Not Available | Positive | 4176883 - 4177803 | 33261.9 |
| had-superfamily class iia hydrolase, tigr01459 | SAMN04488094_11622 | Not Available | Positive | 4177981 - 4178850 | 31476.3 |
| 3-hydroxybutyryl-coa dehydratase | SAMN04488094_11623 | Not Available | Positive | 4179072 - 4179518 | 16440.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
