Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone ibpa | SAMN04488094_1164 | Not Available | Negative | 4162678 - 4163136 | 17070.2 |
| protease ydgd | SAMN04488094_1165 | Not Available | Negative | 4163306 - 4164151 | 29931.6 |
| v8-like glu-specific endopeptidase | SAMN04488094_1166 | Not Available | Negative | 4164148 - 4164972 | 29360.7 |
| glycolate oxidase iron-sulfur subunit | SAMN04488094_1167 | Not Available | Negative | 4165046 - 4166347 | 46648.8 |
| glycolate oxidase fad binding subunit | SAMN04488094_1168 | Not Available | Negative | 4166359 - 4167486 | 38783.5 |
| glycolate oxidase | SAMN04488094_1169 | Not Available | Negative | 4167483 - 4168916 | 51071.9 |
| uncharacterized membrane protein | SAMN04488094_11610 | Not Available | Positive | 4169003 - 4169701 | 26041.8 |
| hypothetical protein | SAMN04488094_11611 | Not Available | Positive | 4169788 - 4170168 | 13714.2 |
| ssu ribosomal protein s12p methylthiotransferase | SAMN04488094_11612 | Not Available | Positive | 4170216 - 4171598 | 50698.4 |
| hypothetical protein | SAMN04488094_11613 | Not Available | Negative | 4171651 - 4171944 | 10524.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
