Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l2p | SAMN04488094_115126 | Not Available | Negative | 4153935 - 4154777 | 30490.8 |
| hypothetical protein | SAMN04488094_115127 | Not Available | Negative | 4156588 - 4156878 | 10152.3 |
| lsu ribosomal protein l23p | SAMN04488094_115128 | Not Available | Negative | 4157153 - 4157449 | 10734.1 |
| lsu ribosomal protein l4p | SAMN04488094_115129 | Not Available | Negative | 4157446 - 4158066 | 22388.1 |
| lsu ribosomal protein l3p | SAMN04488094_115130 | Not Available | Negative | 4158063 - 4158905 | 29904.6 |
| ssu ribosomal protein s10p | SAMN04488094_115131 | Not Available | Negative | 4158920 - 4159231 | 11772.3 |
| translation elongation factor tu | SAMN04488094_115132 | Not Available | Negative | 4159363 - 4159981 | 22461.0 |
| succinyl-diaminopimelate desuccinylase | SAMN04488094_1161 | Not Available | Negative | 4160202 - 4161500 | 47254.5 |
| hypothetical protein | SAMN04488094_1162 | Not Available | Positive | 4161687 - 4161959 | 10405.9 |
| protein of unknown function | SAMN04488094_1163 | Not Available | Positive | 4161970 - 4162533 | 21967.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
