Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiosulfate reductase cytochrome b subunit | SAMN04488094_11586 | Not Available | Positive | 4122530 - 4123192 | 25891.8 |
| rnd family efflux transporter, mfp subunit | SAMN04488094_11587 | Not Available | Positive | 4123400 - 4124380 | 34543.5 |
| multidrug efflux pump subunit acrb | SAMN04488094_11588 | Not Available | Positive | 4124373 - 4127579 | 115145.0 |
| n-acetylglutamate kinase | SAMN04488094_11589 | Not Available | Positive | 4127730 - 4128617 | 31225.2 |
| phosphohistidine phosphatase | SAMN04488094_11590 | Not Available | Positive | 4128706 - 4129230 | 19299.9 |
| l-glutamine abc transporter atp-binding protein /l-glutamate abc transporter atp-binding protein /l-aspartate abc transporter atp-binding protein /l-asparagine abc transporter atp-binding protein | SAMN04488094_11591 | Not Available | Negative | 4129237 - 4130028 | 29979.4 |
| l-glutamine abc transporter membrane protein /l-glutamate abc transporter membrane protein /l-aspartate abc transporter membrane protein /l-asparagine abc transporter membrane protein | SAMN04488094_11592 | Not Available | Negative | 4130038 - 4131330 | 47782.8 |
| l-glutamine abc transporter membrane protein /l-glutamate abc transporter membrane protein /l-aspartate abc transporter membrane protein /l-asparagine abc transporter membrane protein | SAMN04488094_11593 | Not Available | Negative | 4131332 - 4132651 | 48026.7 |
| general l-amino acid transport system substrate-binding protein | SAMN04488094_11594 | Not Available | Negative | 4132784 - 4133800 | 35731.0 |
| chaperone required for the assembly of the f1-atpase | SAMN04488094_11595 | Not Available | Negative | 4134041 - 4134760 | 26035.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
