Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease i | SAMN04488094_11576 | Not Available | Positive | 4112519 - 4113079 | 20191.4 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488094_11577 | Not Available | Positive | 4113308 - 4114141 | 30491.2 |
| prc-barrel domain-containing protein | SAMN04488094_11578 | Not Available | Negative | 4114289 - 4115440 | 41047.6 |
| phospholipase_d-nuclease n-terminal | SAMN04488094_11579 | Not Available | Positive | 4115694 - 4115885 | 6716.67 |
| membrane protein | SAMN04488094_11580 | Not Available | Positive | 4115899 - 4116888 | 36383.4 |
| hypothetical protein | SAMN04488094_11581 | Not Available | Negative | 4116896 - 4117570 | 24915.4 |
| cbs domain-containing protein | SAMN04488094_11582 | Not Available | Positive | 4117842 - 4118351 | 18877.1 |
| possible tyrosine transporter p-protein (tc 2.a.45.2.1) | SAMN04488094_11583 | Not Available | Positive | 4118358 - 4119719 | 48210.5 |
| predicted fe2+/mn2+ transporter, vit1/ccc1 family | SAMN04488094_11584 | Not Available | Negative | 4119746 - 4120483 | 26477.3 |
| octaheme c-type cytochrome, tetrathionate reductase family | SAMN04488094_11585 | Not Available | Positive | 4120885 - 4122528 | 59546.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
