Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal-body rod protein flgc | SAMN04488094_11566 | Not Available | Negative | 4102956 - 4103348 | 14455.1 |
| flagellar basal-body rod protein flgb | SAMN04488094_11567 | Not Available | Negative | 4103361 - 4103750 | 14239.7 |
| flagellum-specific atp synthase | SAMN04488094_11568 | Not Available | Positive | 4103830 - 4105146 | 46162.4 |
| hypothetical protein | SAMN04488094_11569 | Not Available | Negative | 4105184 - 4106383 | 42845.4 |
| hypothetical protein | SAMN04488094_11570 | Not Available | Positive | 4106686 - 4107051 | 13293.1 |
| hypothetical protein | SAMN04488094_11571 | Not Available | Positive | 4107175 - 4107495 | 11051.0 |
| undecaprenyl-diphosphatase | SAMN04488094_11572 | Not Available | Positive | 4107636 - 4108319 | 24446.3 |
| dna end-binding protein ku | SAMN04488094_11573 | Not Available | Positive | 4108391 - 4109245 | 31444.4 |
| atp-dependent dna ligase ligd phosphoesterase module/atp-dependent dna ligase ligd polymerase module | SAMN04488094_11574 | Not Available | Positive | 4109258 - 4111675 | 89210.1 |
| uncharacterized conserved protein | SAMN04488094_11575 | Not Available | Positive | 4111810 - 4112430 | 22258.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
