Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monosaccharide abc transporter membrane protein, cut2 family | SAMN04488094_101194 | Not Available | Negative | 206013 - 207008 | 34784.0 |
| ribose transport system substrate-binding protein | SAMN04488094_101195 | Not Available | Negative | 207075 - 208115 | 36927.9 |
| d-xylose transport system atp-binding protein | SAMN04488094_101196 | Not Available | Negative | 208112 - 208930 | 29524.7 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN04488094_101197 | Not Available | Negative | 208927 - 210102 | 41882.1 |
| transcriptional regulator, iclr family | SAMN04488094_101198 | Not Available | Negative | 210261 - 211070 | 29569.2 |
| reactive intermediate/imine deaminase | SAMN04488094_101199 | Not Available | Negative | 211123 - 211512 | 14139.8 |
| polar amino acid transport system atp-binding protein | SAMN04488094_101200 | Not Available | Negative | 211526 - 212293 | 28429.7 |
| polar amino acid transport system permease protein | SAMN04488094_101201 | Not Available | Negative | 212303 - 212965 | 24110.3 |
| polar amino acid transport system permease protein | SAMN04488094_101202 | Not Available | Negative | 212974 - 213636 | 24113.3 |
| polar amino acid transport system substrate-binding protein | SAMN04488094_101203 | Not Available | Negative | 213662 - 214495 | 30455.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
