Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| agmatinase | SAMN04488094_11556 | Not Available | Positive | 4096887 - 4097852 | 34446.6 |
| Trna-trp | Not Available | Not Available | Positive | 4098006 - 4098081 | Not Available |
| hypothetical protein | SAMN04488094_11558 | Not Available | Positive | 4098352 - 4098561 | 7632.25 |
| flagellar basal body-associated protein flil | SAMN04488094_11559 | Not Available | Negative | 4099127 - 4099666 | 18978.5 |
| flagellar l-ring protein precursor flgh | SAMN04488094_11560 | Not Available | Negative | 4099677 - 4100405 | 26700.9 |
| flagella basal body p-ring formation protein flga | SAMN04488094_11561 | Not Available | Negative | 4100433 - 4100876 | 15382.5 |
| flagellar basal-body rod protein flgg | SAMN04488094_11562 | Not Available | Negative | 4100873 - 4101658 | 27325.1 |
| flagellar basal-body rod protein flgf | SAMN04488094_11563 | Not Available | Negative | 4101671 - 4102384 | 25068.6 |
| flagellar biosynthetic protein fliq | SAMN04488094_11564 | Not Available | Negative | 4102388 - 4102654 | 9705.22 |
| flagellar hook-basal body complex protein flie | SAMN04488094_11565 | Not Available | Negative | 4102659 - 4102943 | 9683.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
