Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate transporter | SAMN04488094_11536 | Not Available | Positive | 4076010 - 4076867 | 30356.6 |
| pyruvate formate lyase activating enzyme | SAMN04488094_11537 | Not Available | Negative | 4077023 - 4077802 | 28534.2 |
| formate c-acetyltransferase | SAMN04488094_11538 | Not Available | Negative | 4077825 - 4080080 | 83410.5 |
| hypothetical protein | SAMN04488094_11539 | Not Available | Negative | 4080597 - 4082207 | 57069.1 |
| hypothetical protein | SAMN04488094_11540 | Not Available | Negative | 4082179 - 4083051 | 32686.0 |
| feruloyl-coa synthase | SAMN04488094_11541 | Not Available | Negative | 4083142 - 4084959 | 66180.3 |
| dna-binding transcriptional regulator, marr family | SAMN04488094_11542 | Not Available | Negative | 4084983 - 4085465 | 17851.8 |
| vanillin synthase /trans-feruloyl-coa hydratase | SAMN04488094_11543 | Not Available | Negative | 4085551 - 4086318 | 27257.1 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488094_11544 | Not Available | Negative | 4086329 - 4087093 | 26312.7 |
| trap transporter, dctm subunit | SAMN04488094_11545 | Not Available | Negative | 4087186 - 4088502 | 46851.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
