Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoleucyl-trna synthetase | SAMN04488094_11526 | Not Available | Negative | 4063114 - 4066041 | 109772.0 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN04488094_11527 | Not Available | Negative | 4066361 - 4067047 | 24723.0 |
| phosphomannomutase | SAMN04488094_11528 | Not Available | Negative | 4067140 - 4068510 | 49372.7 |
| uncharacterized membrane protein | SAMN04488094_11529 | Not Available | Positive | 4068682 - 4069347 | 23877.8 |
| hypothetical protein | SAMN04488094_11530 | Not Available | Positive | 4069456 - 4070481 | 36309.9 |
| glucosamine kinase | SAMN04488094_11531 | Not Available | Positive | 4070592 - 4071458 | 29731.9 |
| glutamine--fructose-6-phosphate transaminase | SAMN04488094_11532 | Not Available | Positive | 4071501 - 4072532 | 36897.2 |
| ferrous iron transport protein a | SAMN04488094_11533 | Not Available | Positive | 4072786 - 4073106 | 11620.2 |
| ferrous iron transport protein b | SAMN04488094_11534 | Not Available | Positive | 4073099 - 4075609 | 90703.7 |
| hypothetical protein | SAMN04488094_11535 | Not Available | Positive | 4075606 - 4075854 | 8404.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
