Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ureidoglycolate lyase | SAMN04488094_11516 | Not Available | Positive | 4054778 - 4055269 | 17757.1 |
| hypothetical protein | SAMN04488094_11517 | Not Available | Negative | 4055342 - 4055461 | 4786.01 |
| transcriptional regulator, arsr family | SAMN04488094_11518 | Not Available | Positive | 4055646 - 4056503 | 31386.7 |
| glyceraldehyde 3-phosphate dehydrogenase | SAMN04488094_11519 | Not Available | Positive | 4056555 - 4057568 | 36569.9 |
| hypothetical protein | SAMN04488094_11520 | Not Available | Positive | 4057565 - 4058869 | 45921.8 |
| cofd-related protein, gak system | SAMN04488094_11521 | Not Available | Negative | 4058824 - 4060011 | 42568.7 |
| protein of unknown function | SAMN04488094_11522 | Not Available | Positive | 4060405 - 4061715 | 46970.1 |
| Trna-ala | Not Available | Not Available | Positive | 4061838 - 4061913 | Not Available |
| thioredoxin | SAMN04488094_11524 | Not Available | Negative | 4061949 - 4062395 | 16019.3 |
| nitric oxide dioxygenase | SAMN04488094_11525 | Not Available | Positive | 4062622 - 4063041 | 15840.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
