Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdate transport system atp-binding protein | SAMN04488094_114125 | Not Available | Positive | 4031679 - 4032767 | 38133.6 |
| hypothetical protein | SAMN04488094_114126 | Not Available | Negative | 4032780 - 4033550 | 27048.2 |
| (2s)-methylsuccinyl-coa dehydrogenase | SAMN04488094_114127 | Not Available | Positive | 4033702 - 4035399 | 61708.7 |
| hypothetical protein | SAMN04488094_114128 | Not Available | Positive | 4035483 - 4036043 | 20125.0 |
| transposase, mutator family | SAMN04488094_114129 | Not Available | Negative | 4036303 - 4036608 | 11449.7 |
| atp-dependent clp protease atp-binding subunit clpb | SAMN04488094_1151 | Not Available | Negative | 4037108 - 4039723 | 95840.4 |
| hypothetical protein | SAMN04488094_1152 | Not Available | Negative | 4039878 - 4040183 | 10522.5 |
| orotidine-5'-phosphate decarboxylase | SAMN04488094_1153 | Not Available | Positive | 4040281 - 4041000 | 24511.7 |
| hypothetical protein | SAMN04488094_1154 | Not Available | Negative | 4041013 - 4041252 | 8781.61 |
| divalent cation tolerance protein | SAMN04488094_1155 | Not Available | Positive | 4041468 - 4041791 | 11989.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
