Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphocarrier protein | SAMN04488094_114115 | Not Available | Negative | 4021519 - 4021797 | 9692.51 |
| pts system, mannose-specific iia component | SAMN04488094_114116 | Not Available | Negative | 4021798 - 4022199 | 14108.1 |
| upf0042 nucleotide-binding protein | SAMN04488094_114117 | Not Available | Negative | 4022196 - 4023116 | 33802.7 |
| hpr(ser) kinase/phosphatase | SAMN04488094_114118 | Not Available | Negative | 4023113 - 4023649 | 19064.1 |
| two-component system, ompr family, sensor histidine kinase chvg | SAMN04488094_114119 | Not Available | Negative | 4023670 - 4025352 | 60406.3 |
| two component transcriptional regulator, winged helix family | SAMN04488094_114120 | Not Available | Negative | 4025381 - 4026082 | 26733.0 |
| phosphoenolpyruvate carboxykinase (gtp) | SAMN04488094_114121 | Not Available | Positive | 4026426 - 4028288 | 69217.2 |
| phosphoenolpyruvate carboxykinase (atp) | SAMN04488094_114122 | Not Available | Positive | 4028469 - 4030067 | 58783.0 |
| molybdate transport system substrate-binding protein | SAMN04488094_114123 | Not Available | Positive | 4030139 - 4030981 | 28876.3 |
| molybdate transport system permease protein | SAMN04488094_114124 | Not Available | Positive | 4030984 - 4031682 | 24206.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
