Tropicimonas isoalkanivorans strain DSM 19548

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Tropicimonas

Description

Tropicimonas isoalkanivorans strain DSM 19548 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain is mesophilic, with an optimal growth temperature of 37°C, indicating its preference for moderate temperature environments. It possesses a single replicon, which is relevant for its genetic stability and replication processes. The strain is cataloged under the accession number FOLG00000000.1, which facilitates its identification and classification in microbial databases. Its aerobic nature suggests that it relies on oxygen for metabolic processes, which is a key characteristic for understanding its ecological role. In a broader biological context, the characteristics of Tropicimonas isoalkanivorans, particularly its mesophilic nature and aerobic metabolism, may imply its adaptation to specific environmental niches where oxygen is available, such as soil or aquatic ecosystems. The ability to thrive at 37°C could also indicate its potential interactions with other organisms in warmer habitats, possibly influencing nutrient cycling and energy flow within those environments. Further research into its ecological role could provide insights into its contributions to microbial communities and ecosystem function.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusTropicimonas
SpeciesTropicimonas isoalkanivorans
Strainstrain DSM 19548

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tropicimonas isoalkanivorans strain DSM 19548 genome assembly,

Gene Summary

Adenine Count

883330 bp

Thymine Count

875776 bp

Guanine Count

1590237 bp

Cytosine Count

1626123 bp

Genome Length

4976641 bp

Protein-coding Genes

4685 genes

Non-Coding Genes

175 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphocarrier proteinSAMN04488094_114115Not AvailableNegative4021519 - 40217979692.51
pts system, mannose-specific iia componentSAMN04488094_114116Not AvailableNegative4021798 - 402219914108.1
upf0042 nucleotide-binding proteinSAMN04488094_114117Not AvailableNegative4022196 - 402311633802.7
hpr(ser) kinase/phosphataseSAMN04488094_114118Not AvailableNegative4023113 - 402364919064.1
two-component system, ompr family, sensor histidine kinase chvgSAMN04488094_114119Not AvailableNegative4023670 - 402535260406.3
two component transcriptional regulator, winged helix familySAMN04488094_114120Not AvailableNegative4025381 - 402608226733.0
phosphoenolpyruvate carboxykinase (gtp)SAMN04488094_114121Not AvailablePositive4026426 - 402828869217.2
phosphoenolpyruvate carboxykinase (atp)SAMN04488094_114122Not AvailablePositive4028469 - 403006758783.0
molybdate transport system substrate-binding proteinSAMN04488094_114123Not AvailablePositive4030139 - 403098128876.3
molybdate transport system permease proteinSAMN04488094_114124Not AvailablePositive4030984 - 403168224206.5

Displaying genes 3911 – 3920 of 4860 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.