Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhodanese-related sulfurtransferase | SAMN04488094_101184 | Not Available | Negative | 197105 - 197695 | 21782.7 |
| hypothetical protein | SAMN04488094_101185 | Not Available | Negative | 197819 - 198346 | 19137.7 |
| uncharacterized membrane protein | SAMN04488094_101186 | Not Available | Positive | 198766 - 199443 | 25545.9 |
| putative phosphoribosyl transferase | SAMN04488094_101187 | Not Available | Negative | 199463 - 200134 | 24112.2 |
| dienelactone hydrolase | SAMN04488094_101188 | Not Available | Negative | 200131 - 200781 | 22598.0 |
| fructoselysine-6-p-deglycase frlb with duplicated sugar isomerase (sis) domain | SAMN04488094_101189 | Not Available | Positive | 201118 - 202023 | 31173.6 |
| sugar or nucleoside kinase, ribokinase family | SAMN04488094_101190 | Not Available | Positive | 202028 - 202936 | 32068.9 |
| l-seryl-trna(ser) seleniumtransferase | SAMN04488094_101191 | Not Available | Negative | 202946 - 204142 | 41087.3 |
| d-serine deaminase, pyridoxal phosphate-dependent | SAMN04488094_101192 | Not Available | Negative | 204149 - 205249 | 39121.9 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN04488094_101193 | Not Available | Negative | 205246 - 206016 | 26366.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
