Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-threonine o-3-phosphate decarboxylase | SAMN04488094_11485 | Not Available | Negative | 3997316 - 3998293 | 34883.3 |
| response regulator receiver domain-containing protein | SAMN04488094_11486 | Not Available | Positive | 3998485 - 3998850 | 13689.5 |
| hypothetical protein | SAMN04488094_11487 | Not Available | Positive | 3998970 - 3999323 | 12948.3 |
| l,d-transpeptidase catalytic domain | SAMN04488094_11488 | Not Available | Negative | 3999336 - 3999881 | 20277.2 |
| cystathione beta-lyase | SAMN04488094_11489 | Not Available | Negative | 3999878 - 4001047 | 43219.4 |
| peptide deformylase | SAMN04488094_11490 | Not Available | Positive | 4001140 - 4001670 | 20084.3 |
| peptide deformylase | SAMN04488094_11491 | Not Available | Positive | 4001676 - 4002182 | 18888.8 |
| methionyl-trna formyltransferase | SAMN04488094_11492 | Not Available | Positive | 4002179 - 4003078 | 31845.7 |
| ribonuclease hi | SAMN04488094_11493 | Not Available | Negative | 4003303 - 4003755 | 16475.6 |
| methyltransferase domain-containing protein | SAMN04488094_11494 | Not Available | Negative | 4003795 - 4004388 | 21910.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
