Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth domain-containing protein | SAMN04488094_11475 | Not Available | Negative | 3988236 - 3988925 | 25709.0 |
| hypothetical protein | SAMN04488094_11476 | Not Available | Negative | 3988927 - 3989313 | 13287.8 |
| ribonuclease t2 | SAMN04488094_11477 | Not Available | Negative | 3989386 - 3990015 | 23217.5 |
| hypothetical protein | SAMN04488094_11478 | Not Available | Positive | 3990139 - 3990912 | 28509.3 |
| isopentenyl-diphosphate delta-isomerase | SAMN04488094_11479 | Not Available | Negative | 3991260 - 3991793 | 20672.9 |
| cytochrome c | SAMN04488094_11480 | Not Available | Positive | 3992169 - 3992591 | 14945.0 |
| peptide/nickel transport system substrate-binding protein | SAMN04488094_11481 | Not Available | Positive | 3992670 - 3994139 | 52957.8 |
| transcriptional regulator, deor family | SAMN04488094_11482 | Not Available | Positive | 3994275 - 3995042 | 26126.9 |
| major facilitator superfamily protein | SAMN04488094_11483 | Not Available | Positive | 3995035 - 3996210 | 40367.1 |
| adenosylcobinamide-phosphate synthase | SAMN04488094_11484 | Not Available | Negative | 3996402 - 3997319 | 32127.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
