Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-alanine-dl-glutamate epimerase | SAMN04488094_11455 | Not Available | Positive | 3970603 - 3971568 | 33741.5 |
| hypothetical protein | SAMN04488094_11456 | Not Available | Positive | 3971570 - 3972190 | 21998.0 |
| d-alanine transaminase | SAMN04488094_11457 | Not Available | Positive | 3972246 - 3973106 | 31529.8 |
| hypothetical protein | SAMN04488094_11458 | Not Available | Negative | 3973115 - 3973510 | 14430.2 |
| hypothetical protein | SAMN04488094_11459 | Not Available | Negative | 3973500 - 3974135 | 23008.8 |
| hypothetical protein | SAMN04488094_11460 | Not Available | Negative | 3974209 - 3974529 | 12460.5 |
| predicted n-formylglutamate amidohydrolase | SAMN04488094_11461 | Not Available | Negative | 3974557 - 3975300 | 27185.2 |
| pyruvate kinase | SAMN04488094_11462 | Not Available | Positive | 3975434 - 3976882 | 52206.0 |
| hypothetical protein | SAMN04488094_11463 | Not Available | Positive | 3976916 - 3977146 | 8133.08 |
| lsu ribosomal protein l35p | SAMN04488094_11464 | Not Available | Positive | 3977291 - 3977491 | 7459.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
