Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiosulfate-binding protein soxy | SAMN04488094_11425 | Not Available | Positive | 3939476 - 3939892 | 13606.3 |
| sulfur-oxidizing protein soxz | SAMN04488094_11426 | Not Available | Positive | 3939913 - 3940242 | 11974.1 |
| sulfur-oxidizing protein soxa | SAMN04488094_11427 | Not Available | Positive | 3940323 - 3941180 | 31407.7 |
| sulfate thiol esterase soxb | SAMN04488094_11428 | Not Available | Positive | 3941298 - 3943001 | 62222.7 |
| sulfur dehydrogenase subunit soxc | SAMN04488094_11429 | Not Available | Positive | 3943070 - 3944353 | 46865.0 |
| sulfur dehydrogenase subunit soxd | SAMN04488094_11430 | Not Available | Positive | 3944337 - 3945941 | 55317.0 |
| cytochrome c | SAMN04488094_11431 | Not Available | Positive | 3945938 - 3946651 | 25185.9 |
| cytochrome-dependent sulfide dehydrogenase (flavoprotein) | SAMN04488094_11432 | Not Available | Positive | 3946696 - 3947967 | 44860.5 |
| uncharacterized conserved protein, duf302 family | SAMN04488094_11433 | Not Available | Positive | 3947997 - 3948455 | 16448.5 |
| sulfotransferase family protein | SAMN04488094_11434 | Not Available | Negative | 3948468 - 3949526 | 40271.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
