Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | SAMN04488094_11415 | Not Available | Positive | 3930721 - 3931860 | 40876.7 |
| hypothetical protein | SAMN04488094_11416 | Not Available | Negative | 3931890 - 3932315 | 14765.5 |
| phosphate butyryltransferase | SAMN04488094_11417 | Not Available | Positive | 3932682 - 3934079 | 50260.5 |
| predicted oxidoreductase | SAMN04488094_11418 | Not Available | Positive | 3934241 - 3935227 | 35632.5 |
| hypothetical protein | SAMN04488094_11419 | Not Available | Negative | 3935319 - 3936374 | 35708.2 |
| dna-binding transcriptional regulator, arsr family | SAMN04488094_11420 | Not Available | Negative | 3936434 - 3936964 | 19464.1 |
| hypothetical protein | SAMN04488094_11421 | Not Available | Negative | 3936957 - 3937337 | 14200.2 |
| cytochrome c-type biogenesis protein | SAMN04488094_11422 | Not Available | Positive | 3937416 - 3938150 | 25773.4 |
| thioredoxin-like domain-containing protein | SAMN04488094_11423 | Not Available | Positive | 3938182 - 3938757 | 21828.2 |
| monoheme cytochrome soxx (sulfur oxidation) | SAMN04488094_11424 | Not Available | Positive | 3938952 - 3939431 | 16659.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
