Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, deor family | SAMN04488094_113141 | Not Available | Positive | 3906606 - 3907355 | 27069.7 |
| triosephosphate isomerase | SAMN04488094_113142 | Not Available | Positive | 3907352 - 3908119 | 27776.0 |
| ribose 5-phosphate isomerase b | SAMN04488094_113143 | Not Available | Positive | 3908142 - 3908600 | 15797.5 |
| predicted small secreted protein | SAMN04488094_113144 | Not Available | Negative | 3908734 - 3908880 | 5013.89 |
| hypothetical protein | SAMN04488094_113145 | Not Available | Negative | 3908946 - 3909224 | 9812.57 |
| transposase, is5 family | SAMN04488094_113146 | Not Available | Positive | 3909317 - 3909595 | 10921.2 |
| hemolysin-type calcium-binding repeat-containing protein | SAMN04488094_1141 | Not Available | Positive | 3909596 - 3911038 | 51148.1 |
| 4-alpha-glucanotransferase | SAMN04488094_1142 | Not Available | Negative | 3911118 - 3914672 | 128044.0 |
| glycogen operon protein | SAMN04488094_1143 | Not Available | Negative | 3914672 - 3916762 | 78395.1 |
| starch synthase | SAMN04488094_1144 | Not Available | Negative | 3916759 - 3918195 | 50635.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
