Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative glutamine amidotransferase | SAMN04488094_113131 | Not Available | Positive | 3898361 - 3899101 | 26711.9 |
| general stress protein 26 | SAMN04488094_113132 | Not Available | Negative | 3899229 - 3899735 | 18602.9 |
| uncharacterized conserved protein yjbj, upf0337 family | SAMN04488094_113133 | Not Available | Negative | 3899739 - 3900074 | 12961.4 |
| peptide-methionine (r)-s-oxide reductase | SAMN04488094_113134 | Not Available | Negative | 3900074 - 3900538 | 17295.7 |
| phospholipase d1/2 | SAMN04488094_113135 | Not Available | Negative | 3900649 - 3902166 | 56245.7 |
| starvation-inducible dna-binding protein | SAMN04488094_113136 | Not Available | Negative | 3902344 - 3902844 | 17938.2 |
| uncharacterized membrane protein ytja, upf0391 family | SAMN04488094_113137 | Not Available | Negative | 3902954 - 3903130 | 6113.88 |
| rho termination factor, n-terminal domain | SAMN04488094_113138 | Not Available | Negative | 3903238 - 3903501 | 9800.21 |
| transaldolase | SAMN04488094_113139 | Not Available | Negative | 3903737 - 3904390 | 23262.0 |
| transketolase | SAMN04488094_113140 | Not Available | Negative | 3904403 - 3906427 | 71096.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
