Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate phosphoribosyltransferase | SAMN04488094_113121 | Not Available | Negative | 3886091 - 3887383 | 49871.8 |
| nicotinamidase/pyrazinamidase | SAMN04488094_113122 | Not Available | Negative | 3887495 - 3888097 | 21533.4 |
| upf0176 protein | SAMN04488094_113123 | Not Available | Positive | 3888146 - 3889099 | 35046.9 |
| lysophospholipase, alpha-beta hydrolase superfamily | SAMN04488094_113124 | Not Available | Negative | 3889106 - 3890059 | 34260.0 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN04488094_113125 | Not Available | Positive | 3890301 - 3891770 | 52733.3 |
| sucrose phosphorylase | SAMN04488094_113126 | Not Available | Positive | 3891849 - 3893591 | 65796.3 |
| response regulator receiver protein | SAMN04488094_113127 | Not Available | Negative | 3893690 - 3894499 | 29053.9 |
| rna polymerase, sigma-24 subunit, rpoe | SAMN04488094_113128 | Not Available | Positive | 3894809 - 3895366 | 20575.5 |
| signal transduction histidine kinase | SAMN04488094_113129 | Not Available | Positive | 3895468 - 3897183 | 62722.0 |
| putative amidoligase enzyme | SAMN04488094_113130 | Not Available | Positive | 3897318 - 3898361 | 37313.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
