Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adomet dependent proline di-methyltransferase | SAMN04488094_113110 | Not Available | Negative | 3877803 - 3878441 | 23952.2 |
| hypothetical protein | SAMN04488094_113111 | Not Available | Positive | 3878630 - 3878947 | 11610.7 |
| hypothetical protein | SAMN04488094_113112 | Not Available | Negative | 3878989 - 3879840 | 31672.7 |
| 2,3,4,5-tetrahydropyridine-2-carboxylate n-succinyltransferase | SAMN04488094_113113 | Not Available | Positive | 3880038 - 3880877 | 29849.6 |
| uncharacterized membrane protein yeaq/ymge, transglycosylase-associated protein family | SAMN04488094_113114 | Not Available | Positive | 3880952 - 3881200 | 8697.1 |
| hypothetical protein | SAMN04488094_113115 | Not Available | Positive | 3881292 - 3881606 | 11314.3 |
| mfs transporter, umf1 family | SAMN04488094_113116 | Not Available | Positive | 3882248 - 3883621 | 48902.8 |
| penicillin-insensitive murein endopeptidase | SAMN04488094_113117 | Not Available | Positive | 3883585 - 3884481 | 32724.0 |
| hypothetical protein | SAMN04488094_113118 | Not Available | Positive | 3884609 - 3885247 | 22975.6 |
| ribosome-associated protein | SAMN04488094_113120 | Not Available | Positive | 3885646 - 3886068 | 15980.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
