Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-threonine 3-dehydrogenase | SAMN04488094_113100 | Not Available | Negative | 3865737 - 3866771 | 37501.5 |
| 2-amino-3-ketobutyrate coenzyme a ligase | SAMN04488094_113101 | Not Available | Negative | 3866768 - 3867961 | 42718.3 |
| pas fold | SAMN04488094_113102 | Not Available | Positive | 3868112 - 3870469 | 86805.9 |
| hypothetical protein | SAMN04488094_113103 | Not Available | Negative | 3870538 - 3871323 | 28498.1 |
| atp-dependent dna helicase recq | SAMN04488094_113104 | Not Available | Negative | 3871384 - 3873441 | 74054.7 |
| yggt family protein | SAMN04488094_113105 | Not Available | Negative | 3873528 - 3873818 | 11002.1 |
| succinyldiaminopimelate desuccinylase | SAMN04488094_113106 | Not Available | Positive | 3874015 - 3875154 | 40328.7 |
| hypothetical protein | SAMN04488094_113107 | Not Available | Positive | 3875157 - 3875750 | 21968.7 |
| 23s rrna m(2)a-2503 methyltransferase | SAMN04488094_113108 | Not Available | Positive | 3875954 - 3877141 | 43883.0 |
| uncharacterized membrane protein hded, duf308 family | SAMN04488094_113109 | Not Available | Negative | 3877191 - 3877715 | 18677.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
