Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN04488094_11389 | Not Available | Negative | 3855402 - 3856280 | 31571.5 |
| trna u34 5-methylaminomethyl-2-thiouridine-forming methyltransferase mnmc | SAMN04488094_11390 | Not Available | Negative | 3856277 - 3856954 | 24385.7 |
| glycine/d-amino acid oxidase | SAMN04488094_11391 | Not Available | Positive | 3857006 - 3858052 | 37314.4 |
| hypothetical protein | SAMN04488094_11392 | Not Available | Negative | 3858131 - 3858652 | 18303.5 |
| asparaginase | SAMN04488094_11393 | Not Available | Positive | 3858818 - 3859813 | 35426.4 |
| phosphoserine phosphatase | SAMN04488094_11394 | Not Available | Negative | 3859829 - 3860707 | 31195.5 |
| phosphoserine aminotransferase apoenzyme | SAMN04488094_11396 | Not Available | Positive | 3861180 - 3862334 | 41173.0 |
| d-3-phosphoglycerate dehydrogenase | SAMN04488094_11397 | Not Available | Positive | 3862408 - 3864003 | 56749.9 |
| serine/threonine protein phosphatase 1 | SAMN04488094_11398 | Not Available | Positive | 3864026 - 3864823 | 29060.6 |
| dnaj domain-containing protein | SAMN04488094_11399 | Not Available | Positive | 3865076 - 3865708 | 22019.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
