Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ammonium transporter | SAMN04488094_11379 | Not Available | Positive | 3845210 - 3846556 | 47583.9 |
| rhodanese-related sulfurtransferase | SAMN04488094_11380 | Not Available | Negative | 3846632 - 3847018 | 13810.6 |
| aromatic amino acid aminotransferase apoenzyme | SAMN04488094_11381 | Not Available | Negative | 3847186 - 3848370 | 42665.0 |
| hypothetical protein | SAMN04488094_11382 | Not Available | Negative | 3848379 - 3848945 | 21569.9 |
| thiosulfate/3-mercaptopyruvate sulfurtransferase | SAMN04488094_11383 | Not Available | Negative | 3848942 - 3849793 | 31620.4 |
| ssra-binding protein | SAMN04488094_11384 | Not Available | Negative | 3849942 - 3850415 | 18199.0 |
| zc3h12a-like ribonuclease nyn domain-containing protein | SAMN04488094_11385 | Not Available | Positive | 3850561 - 3851115 | 20822.2 |
| hypothetical protein | SAMN04488094_11386 | Not Available | Negative | 3851141 - 3852142 | 35842.4 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN04488094_11387 | Not Available | Negative | 3852151 - 3853065 | 32227.9 |
| soluble lytic murein transglycosylase | SAMN04488094_11388 | Not Available | Positive | 3853210 - 3855162 | 71481.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
