Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pterin-4-alpha-carbinolamine dehydratase | SAMN04488094_11369 | Not Available | Negative | 3834732 - 3835037 | 11358.5 |
| hypothetical protein | SAMN04488094_11370 | Not Available | Negative | 3835034 - 3836224 | 44209.8 |
| glycerophosphoryl diester phosphodiesterase | SAMN04488094_11371 | Not Available | Negative | 3836277 - 3837032 | 26816.7 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN04488094_11372 | Not Available | Negative | 3837044 - 3837508 | 15591.8 |
| hlyd family secretion protein | SAMN04488094_11373 | Not Available | Negative | 3837531 - 3838832 | 48179.4 |
| atp-binding cassette, subfamily c | SAMN04488094_11374 | Not Available | Negative | 3838829 - 3840565 | 62566.4 |
| phospholipid-binding lipoprotein mlaa | SAMN04488094_11375 | Not Available | Positive | 3840761 - 3841531 | 27740.9 |
| phospholipid transport system substrate-binding protein | SAMN04488094_11376 | Not Available | Positive | 3841521 - 3842147 | 22615.2 |
| penicillin-binding protein, 1a family | SAMN04488094_11377 | Not Available | Negative | 3842339 - 3844570 | 80277.2 |
| nitrogen regulatory protein p-ii family | SAMN04488094_11378 | Not Available | Positive | 3844838 - 3845176 | 12220.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
