Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lysr family | SAMN04488094_11359 | Not Available | Positive | 3826538 - 3827443 | 33285.9 |
| ompa-ompf porin, oop family | SAMN04488094_11360 | Not Available | Negative | 3827506 - 3828507 | 34784.3 |
| acetyltransferase (gnat) family protein | SAMN04488094_11361 | Not Available | Negative | 3828532 - 3829245 | 25044.3 |
| molybdenum cofactor synthesis domain-containing protein | SAMN04488094_11362 | Not Available | Negative | 3829242 - 3829973 | 25669.8 |
| sugar fermentation stimulation protein a | SAMN04488094_11363 | Not Available | Positive | 3830022 - 3830741 | 26289.6 |
| methionine aminopeptidase, type i | SAMN04488094_11364 | Not Available | Positive | 3830816 - 3831622 | 29141.8 |
| regulatory protein, luxr family | SAMN04488094_11365 | Not Available | Negative | 3831616 - 3832152 | 19374.4 |
| peptidase propeptide and ypeb domain-containing protein | SAMN04488094_11366 | Not Available | Negative | 3832250 - 3832741 | 17611.9 |
| 16s rrna (guanine966-n2)-methyltransferase | SAMN04488094_11367 | Not Available | Negative | 3832863 - 3833447 | 20278.3 |
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit | SAMN04488094_11368 | Not Available | Negative | 3833447 - 3834655 | 42768.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
