Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase (gnat) family protein | SAMN04488094_11339 | Not Available | Negative | 3803965 - 3804582 | 23242.2 |
| protein imub | SAMN04488094_11340 | Not Available | Negative | 3804688 - 3806364 | 60283.8 |
| rnase r | SAMN04488094_11341 | Not Available | Positive | 3806605 - 3808914 | 85049.6 |
| lytic murein transglycosylase | SAMN04488094_11342 | Not Available | Positive | 3809020 - 3810294 | 45480.5 |
| peptidase inhibitor i78 family protein | SAMN04488094_11343 | Not Available | Negative | 3810383 - 3810829 | 15398.4 |
| s-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase | SAMN04488094_11344 | Not Available | Positive | 3810903 - 3812015 | 39207.2 |
| ost-hth/lotus domain-containing protein | SAMN04488094_11345 | Not Available | Positive | 3812118 - 3812840 | 26801.7 |
| hypothetical protein | SAMN04488094_11346 | Not Available | Positive | 3813046 - 3814194 | 41164.4 |
| transcriptional regulator, tetr family | SAMN04488094_11347 | Not Available | Negative | 3814244 - 3814861 | 22853.4 |
| hypothetical protein | SAMN04488094_11348 | Not Available | Positive | 3815044 - 3815970 | 32270.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
