Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homodimeric glycerol 3-phosphate dehydrogenase (quinone) | SAMN04488094_101164 | Not Available | Negative | 173013 - 174605 | 58825.8 |
| transcriptional regulator, deor family | SAMN04488094_101165 | Not Available | Negative | 174580 - 175377 | 29223.8 |
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN04488094_101166 | Not Available | Positive | 175526 - 177262 | 64501.2 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN04488094_101167 | Not Available | Positive | 177377 - 178459 | 39348.2 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN04488094_101168 | Not Available | Positive | 178452 - 179534 | 39525.3 |
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN04488094_101169 | Not Available | Positive | 179531 - 180391 | 32354.2 |
| carbohydrate abc transporter membrane protein 2, cut1 family | SAMN04488094_101170 | Not Available | Positive | 180388 - 181185 | 29776.9 |
| predicted small integral membrane protein | SAMN04488094_101171 | Not Available | Positive | 181185 - 181592 | 14918.6 |
| glycerol kinase | SAMN04488094_101172 | Not Available | Negative | 181611 - 183029 | 50062.3 |
| thioredoxin reductase | SAMN04488094_101173 | Not Available | Negative | 183029 - 184246 | 42473.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
