Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488094_11329 | Not Available | Negative | 3795350 - 3795886 | 19520.4 |
| signal peptidase ii | SAMN04488094_11330 | Not Available | Negative | 3795942 - 3796424 | 17832.1 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase / imp cyclohydrolase | SAMN04488094_11331 | Not Available | Negative | 3796428 - 3798017 | 56429.3 |
| uncharacterized conserved protein, heparinase superfamily | SAMN04488094_11332 | Not Available | Negative | 3798039 - 3799814 | 64218.6 |
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN04488094_11333 | Not Available | Negative | 3799865 - 3801148 | 45550.8 |
| protein of unknown function | SAMN04488094_11334 | Not Available | Positive | 3801223 - 3801420 | 7193.32 |
| hypothetical protein | SAMN04488094_11335 | Not Available | Positive | 3801517 - 3801831 | 11522.0 |
| dihydrodipicolinate reductase | SAMN04488094_11336 | Not Available | Negative | 3801845 - 3802654 | 28185.8 |
| ribosome-binding factor a | SAMN04488094_11337 | Not Available | Positive | 3802753 - 3803172 | 15840.9 |
| uncharacterized protein yige, duf2233 family | SAMN04488094_11338 | Not Available | Positive | 3803162 - 3803959 | 28481.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
