Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488094_11319 | Not Available | Negative | 3784803 - 3785120 | 11632.7 |
| short-chain dehydrogenase | SAMN04488094_11320 | Not Available | Negative | 3785210 - 3785938 | 25549.8 |
| hypothetical protein | SAMN04488094_11321 | Not Available | Negative | 3785935 - 3786693 | 28285.9 |
| hypothetical protein | SAMN04488094_11322 | Not Available | Negative | 3786690 - 3787994 | 48329.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488094_11323 | Not Available | Positive | 3788212 - 3788772 | 20854.0 |
| anti-ecfsigma factor, chrr | SAMN04488094_11324 | Not Available | Positive | 3788769 - 3789425 | 23228.8 |
| dna recombination protein rmuc | SAMN04488094_11325 | Not Available | Negative | 3789453 - 3790646 | 43322.4 |
| dna mismatch repair protein mutl | SAMN04488094_11326 | Not Available | Negative | 3790643 - 3792475 | 64928.6 |
| zinc protease | SAMN04488094_11327 | Not Available | Negative | 3792550 - 3793863 | 46962.8 |
| zinc protease | SAMN04488094_11328 | Not Available | Negative | 3793860 - 3795257 | 51294.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
