Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zn-dependent peptidase imma, m78 family | SAMN04488094_1139 | Not Available | Positive | 3774564 - 3775634 | 40183.2 |
| carbonic anhydrase | SAMN04488094_11310 | Not Available | Negative | 3775953 - 3776621 | 24898.8 |
| hypothetical protein | SAMN04488094_11311 | Not Available | Positive | 3776780 - 3777166 | 13657.4 |
| leucyl aminopeptidase | SAMN04488094_11312 | Not Available | Positive | 3777262 - 3778644 | 48319.7 |
| cell wall-associated hydrolase, nlpc family | SAMN04488094_11313 | Not Available | Positive | 3778641 - 3779501 | 30762.5 |
| protein of unknown function | SAMN04488094_11314 | Not Available | Negative | 3779482 - 3779826 | 13160.4 |
| trna pseudouridine synthase b | SAMN04488094_11315 | Not Available | Positive | 3780055 - 3781107 | 37402.1 |
| hypothetical protein | SAMN04488094_11316 | Not Available | Positive | 3781104 - 3781628 | 19401.2 |
| ssu ribosomal protein s15p | SAMN04488094_11317 | Not Available | Positive | 3781771 - 3782040 | 10473.8 |
| polyribonucleotide nucleotidyltransferase | SAMN04488094_11318 | Not Available | Positive | 3782434 - 3784575 | 77531.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
