Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-succinylhomoserine sulfhydrylase | SAMN04488094_112130 | Not Available | Positive | 3717593 - 3718771 | 42617.2 |
| uncharacterized membrane protein | SAMN04488094_112131 | Not Available | Negative | 3718817 - 3719056 | 8502.34 |
| helix-turn-helix | SAMN04488094_112132 | Not Available | Positive | 3719172 - 3720035 | 31488.7 |
| gmp synthase (glutamine-hydrolysing) | SAMN04488094_112133 | Not Available | Positive | 3720088 - 3720834 | 27232.6 |
| gtp cyclohydrolase i | SAMN04488094_112134 | Not Available | Positive | 3720938 - 3722041 | 41602.1 |
| trk system potassium uptake protein trkh | SAMN04488094_112135 | Not Available | Positive | 3722146 - 3723594 | 51713.8 |
| putative peptidoglycan binding domain-containing protein | SAMN04488094_112136 | Not Available | Negative | 3723629 - 3725410 | 63209.5 |
| glycyl-trna synthetase alpha chain | SAMN04488094_112137 | Not Available | Positive | 3725630 - 3726559 | 34977.3 |
| hypothetical protein | SAMN04488094_112138 | Not Available | Positive | 3726582 - 3727139 | 19770.4 |
| protein of unknown function | SAMN04488094_112139 | Not Available | Positive | 3727192 - 3728079 | 30738.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
