Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap-type mannitol/chloroaromatic compound transport system, small permease component | SAMN04488094_101154 | Not Available | Negative | 159641 - 160225 | 21930.9 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN04488094_101155 | Not Available | Negative | 160296 - 161426 | 41314.9 |
| amidohydrolase | SAMN04488094_101156 | Not Available | Negative | 161988 - 163169 | 41770.8 |
| hypothetical protein | SAMN04488094_101157 | Not Available | Positive | 163430 - 164392 | 35676.1 |
| tfp pilus assembly protein pilf | SAMN04488094_101158 | Not Available | Negative | 164501 - 165862 | 48634.4 |
| ribonuclease z | SAMN04488094_101159 | Not Available | Positive | 166062 - 167375 | 48389.0 |
| hypothetical protein | SAMN04488094_101160 | Not Available | Positive | 167435 - 169150 | 61815.1 |
| hupe / urej protein | SAMN04488094_101161 | Not Available | Positive | 169147 - 170418 | 44803.6 |
| phenol 2-monooxygenase | SAMN04488094_101162 | Not Available | Negative | 170441 - 172369 | 71572.5 |
| transcriptional regulator, marr family | SAMN04488094_101163 | Not Available | Positive | 172526 - 172978 | 16548.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
