Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized alpha/beta hydrolase domain | SAMN04488094_11299 | Not Available | Positive | 3687498 - 3688559 | 39831.7 |
| hypothetical protein | SAMN04488094_112100 | Not Available | Negative | 3688570 - 3688875 | 10712.0 |
| 5,10-methylenetetrahydrofolate reductase (nad(p)) | SAMN04488094_112101 | Not Available | Negative | 3689034 - 3689900 | 31881.6 |
| lysr family transcriptional regulator, regulator for mete and meth | SAMN04488094_112102 | Not Available | Positive | 3689994 - 3690902 | 34290.6 |
| myo-inositol-1(or 4)-monophosphatase | SAMN04488094_112103 | Not Available | Positive | 3691002 - 3691790 | 28827.4 |
| hypothetical protein | SAMN04488094_112104 | Not Available | Positive | 3691833 - 3692027 | 7009.43 |
| membrane associated serine protease, rhomboid family | SAMN04488094_112105 | Not Available | Negative | 3692064 - 3692795 | 26536.0 |
| Trna-leu | Not Available | Not Available | Positive | 3692916 - 3693001 | Not Available |
| putative atp-binding cassette transporter | SAMN04488094_112107 | Not Available | Positive | 3693133 - 3694917 | 65405.3 |
| hypothetical protein | SAMN04488094_112108 | Not Available | Negative | 3694924 - 3696021 | 39325.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
