Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-sulfoquinovose synthase | SAMN04488094_11289 | Not Available | Positive | 3678968 - 3680185 | 45812.8 |
| alpha-n-acetylglucosamine transferase | SAMN04488094_11290 | Not Available | Positive | 3680192 - 3681034 | 31317.2 |
| nucleoside-diphosphate-sugar epimerase | SAMN04488094_11291 | Not Available | Positive | 3681031 - 3681915 | 30670.8 |
| uncharacterized protein, contains gyd domain | SAMN04488094_11292 | Not Available | Negative | 3681936 - 3682268 | 11451.8 |
| hypothetical protein | SAMN04488094_11293 | Not Available | Negative | 3682348 - 3683187 | 29815.4 |
| l-lysine exporter family protein lyse/argo | SAMN04488094_11294 | Not Available | Positive | 3683359 - 3683964 | 21000.1 |
| threonine/homoserine efflux transporter rhta | SAMN04488094_11295 | Not Available | Positive | 3684026 - 3684925 | 31587.0 |
| hypothetical protein | SAMN04488094_11296 | Not Available | Negative | 3684942 - 3685397 | 16442.5 |
| 8-oxo-dgtp pyrophosphatase mutt, nudix family | SAMN04488094_11297 | Not Available | Negative | 3685474 - 3685953 | 17637.6 |
| acetoin utilization protein acuc | SAMN04488094_11298 | Not Available | Positive | 3686210 - 3687334 | 41350.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
