Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide-binding universal stress protein, uspa family | SAMN04488094_11279 | Not Available | Positive | 3669960 - 3670367 | 14687.6 |
| duf218 domain-containing protein | SAMN04488094_11280 | Not Available | Negative | 3670368 - 3670880 | 18376.2 |
| hypothetical protein | SAMN04488094_11281 | Not Available | Negative | 3670980 - 3671708 | 26472.3 |
| hypothetical protein | SAMN04488094_11282 | Not Available | Negative | 3671823 - 3672053 | 7760.5 |
| excinuclease abc subunit b | SAMN04488094_11283 | Not Available | Negative | 3672585 - 3674789 | 82865.6 |
| nadh dehydrogenase | SAMN04488094_11284 | Not Available | Positive | 3675245 - 3675556 | 11906.2 |
| Trna-arg | Not Available | Not Available | Positive | 3675643 - 3675719 | Not Available |
| response regulator receiver domain-containing protein | SAMN04488094_11286 | Not Available | Negative | 3675767 - 3676114 | 12116.8 |
| two-component sensor histidine kinase, contains hiska and hatpase domains | SAMN04488094_11287 | Not Available | Negative | 3676119 - 3677201 | 40268.2 |
| circadian clock protein kaic | SAMN04488094_11288 | Not Available | Negative | 3677179 - 3678588 | 52001.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
