Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mosc domain-containing protein | SAMN04488094_11259 | Not Available | Positive | 3645939 - 3646538 | 21128.1 |
| methylenetetrahydrofolate dehydrogenase (nadp+) / methenyltetrahydrofolate cyclohydrolase | SAMN04488094_11260 | Not Available | Positive | 3646736 - 3647629 | 31093.0 |
| putative phosphoesterase | SAMN04488094_11261 | Not Available | Negative | 3647678 - 3648346 | 23669.6 |
| pantothenate synthetase | SAMN04488094_11262 | Not Available | Negative | 3648421 - 3649266 | 30911.5 |
| dimethylglycine dehydrogenase | SAMN04488094_11263 | Not Available | Positive | 3649482 - 3651983 | 92405.4 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN04488094_11264 | Not Available | Negative | 3652062 - 3652406 | 12037.5 |
| cbs domain-containing protein | SAMN04488094_11265 | Not Available | Positive | 3652748 - 3653194 | 16311.9 |
| nucleoside-binding protein | SAMN04488094_11266 | Not Available | Negative | 3653260 - 3654336 | 38516.1 |
| voltage-gated potassium channel | SAMN04488094_11267 | Not Available | Negative | 3654339 - 3655151 | 30441.6 |
| nucleoside abc transporter membrane protein | SAMN04488094_11268 | Not Available | Negative | 3655169 - 3656101 | 32127.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
