Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulphur transport | SAMN04488094_11239 | Not Available | Negative | 3627614 - 3628678 | 36388.2 |
| major facilitator superfamily protein | SAMN04488094_11240 | Not Available | Positive | 3628843 - 3630078 | 45107.1 |
| peptide-methionine (s)-s-oxide reductase | SAMN04488094_11241 | Not Available | Positive | 3630145 - 3630807 | 23842.1 |
| adenylate kinase | SAMN04488094_11242 | Not Available | Positive | 3630820 - 3631371 | 20282.2 |
| [lsu ribosomal protein l11p]-lysine n-methyltransferase | SAMN04488094_11243 | Not Available | Positive | 3631461 - 3632333 | 30294.1 |
| hypothetical protein | SAMN04488094_11244 | Not Available | Positive | 3632412 - 3632759 | 12778.6 |
| holliday junction endonuclease ruvc | SAMN04488094_11245 | Not Available | Positive | 3632962 - 3633465 | 17095.8 |
| holliday junction dna helicase subunit ruva | SAMN04488094_11246 | Not Available | Positive | 3633462 - 3634124 | 22901.6 |
| holliday junction dna helicase subunit ruvb | SAMN04488094_11247 | Not Available | Positive | 3634231 - 3635262 | 37479.1 |
| acyl-coa thioester hydrolase | SAMN04488094_11248 | Not Available | Positive | 3635433 - 3635825 | 14650.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
