Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488094_11227 | Not Available | Negative | 3615277 - 3616047 | 26973.2 |
| chac-like protein | SAMN04488094_11228 | Not Available | Negative | 3616173 - 3616727 | 20397.1 |
| aminomethyltransferase | SAMN04488094_11231 | Not Available | Positive | 3617046 - 3618167 | 40252.4 |
| glycine cleavage system h protein | SAMN04488094_11232 | Not Available | Positive | 3618184 - 3618543 | 13147.1 |
| glycine dehydrogenase | SAMN04488094_11233 | Not Available | Positive | 3618686 - 3621523 | 101536.0 |
| phosphatidylcholine synthase | SAMN04488094_11234 | Not Available | Negative | 3621684 - 3622388 | 25958.2 |
| integrase/recombinase xerc | SAMN04488094_11235 | Not Available | Negative | 3622477 - 3623406 | 33181.3 |
| hypothetical protein | SAMN04488094_11236 | Not Available | Negative | 3623394 - 3624107 | 26362.7 |
| transaldolase | SAMN04488094_11237 | Not Available | Negative | 3624426 - 3625079 | 23099.0 |
| replication restart dna helicase pria | SAMN04488094_11238 | Not Available | Positive | 3625304 - 3627502 | 79365.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
