Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas isoalkanivorans |
| Strain | strain DSM 19548 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
883330 bp
Thymine Count
875776 bp
Guanine Count
1590237 bp
Cytosine Count
1626123 bp
Genome Length
4976641 bp
Protein-coding Genes
4685 genes
Non-Coding Genes
175 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| manganese transport protein | SAMN04488094_1127 | Not Available | Positive | 3590364 - 3591659 | 45433.1 |
| l-erythro-3-methylmalyl-coa dehydratase | SAMN04488094_1128 | Not Available | Negative | 3591656 - 3592687 | 37254.2 |
| hypothetical protein | SAMN04488094_1129 | Not Available | Negative | 3592690 - 3592893 | 7400.79 |
| nnru protein | SAMN04488094_11210 | Not Available | Negative | 3592898 - 3593452 | 20065.4 |
| (3s)-malyl-coa thioesterase | SAMN04488094_11211 | Not Available | Negative | 3593463 - 3594332 | 31049.4 |
| malate dehydrogenase (nad) | SAMN04488094_11212 | Not Available | Positive | 3594809 - 3595771 | 33771.0 |
| succinyl-coa synthetase (adp-forming) beta subunit | SAMN04488094_11213 | Not Available | Positive | 3596071 - 3597264 | 42522.4 |
| succinyl-coa synthetase (adp-forming) alpha subunit | SAMN04488094_11214 | Not Available | Positive | 3597392 - 3598273 | 29848.9 |
| 2-oxoglutarate dehydrogenase e1 component | SAMN04488094_11215 | Not Available | Positive | 3598542 - 3601493 | 110307.0 |
| 2-oxoglutarate dehydrogenase e2 component | SAMN04488094_11216 | Not Available | Positive | 3601498 - 3603030 | 53551.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
